Browse of TCMCG056C08108 protein

CDS

Accession Number	TCMCG056C08108
gbkey	CDS
Protein Id	XP_031380388.1
Location	complement(join(29219245..29219286,29219427..29219513,29219595..29219669,29219776..29219889,29220005..29220088,29220348..29220413,29220644..29220709,29220906..29220977,29221107..29221208,29221303..29221480,29221632..29221687,29222343..29222447,29222745..29222813,29222973..29223081,29223163..29223251,29223378..29223455,29223823..29223945,29224301..29224420,29224514..29224594,29224678..29224824,29224908..29224986,29225297..29225371,29226201..29226310,29226861..29226959,29227264..29227379,29227503..29227611,29228087..29228305,29228385..29228650,29229248..29229405,29229530..29229674,29230370..29230436,29230713..29230742))
Gene	LOC116195379
GeneID	116195379
Organism	Punica granatum

Protein

Length	1111aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA580467
db_source	XM_031524528.1
Definition	ubiquitin carboxyl-terminal hydrolase 13-like isoform X2 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin carboxyl-terminal hydrolase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTCTGATGACTCCTTCGCCGTTGGATCAGCAGGAGGACGACGAGATGCTGGTCCCCCACAGCGAGTTCCCCGACGGCCCTCAGCCCATGGAAGCTCAAGCAGAAACTGCAAATACAGTGGATACACAGGCAGCCGATGATCCTCCTTCTGGGAGGTTCACGTGGACAATTGAAAACTTCTCAAGGCTTAATACCAAGAAGCTTTACTCTGATATTTTCGTTGTTGGAGGATATAAATGGCGGATACTTATTTTCCCGAAAGGGAACAATGTGGATCATTTGTCTATATATCTTGATGTTGCGGACTCAGCAACACTTCCATATGGTTGGAGCAGATATGCTCACTTCAGCTTAGCTGTTATAAATCAGATTCATAACAAATTTTCAGTTAGAAAAGAGACGCAGCACCAGTTCAATGCACGGGAAAGTGATTGGGGTTTCACTTCTTTTATGGCTCTGGGTGAACTGTACAACCCAGGCAGAGGTTATCTAGTGAATGATACGTGCATTATTGAAGCTGACGTTGCAGTCCGTAGGATTGTTGATTACTGGTCGCACGATTCGAAGAAGGAGACTGGTTATGTTGGTCTTAAAAATCAAGGAGCAACTTGTTACATGAATTCCCTCCTTCAGACGCTGTATCATATACCTTACTTCAGAAAAGCTGTGTATCATATGCCAACAACTGAAAATGATATGCCATCTGGGAGCATTCCTTTGGCTTTGCAGAGTCTATTCTATAAGCTCCAGTATAGTGAAACTAGTGTGGCAACAAAGGAATTGACAAAGTCCTTTGGATGGGACACTTATGACTCATTCATGCAGCATGATGTACAGGAGCTTAATAGGGTTCTTTCTGAAAAGCTTGAAGATAAGATGAAGGGGACAGTTGTGGAGGGTACTATACAACAGCTGTTTGAAGGGCATCACATGAACTACATTGAGTGCATCAACGTGGATTACAAATCAACCAGAAAGGAGTCATTTTATGATCTCCAGCTTGACGTGAAGGGCTGTCGAGATGTATATGCATCTTTCGACAAATATGTAGAAGTGGAACGGCTTGAAGGTGATAATAAGTATCATGCTGAACAGCATGGCTTACAGGATGCTAAGAAGGGTGTCCTGTTCATCGATTTTCCACCTGTACTTCAGCTTCAGCTGAAAAGGTTTGAGTATGATTTTATGCGGGACACAATGGTTAAGATAAACGATCGCTATGAATTCCCTTTACAACTTGATCTAGACAGAGAGAATGGCAAGTACCTGTCACCCGAGGCAGATCGCAGTGTTCGCAACCTTTACACACTTCATAGTGTTTTGGTTCACAGTGGAGGCGTGCATGGAGGACACTATTATGCTTACATTAGGCCGACTCTCTCTGATCAGTGGTTCAAGTTCGACGATGAGAGGGTGACAAAGGAAGATGTGAAGAGGGCTTTGGAGGAGCAGTACGGTGGGGAAGAAGAGTTGCCACAGACAAATCCGGGTTTCAACAATTCTCCATTTAAATTCACAAAATATTCGAATGCATATATGCTAGTGTATATACGAGAAAGCGACAAGGATAAAATAATCTGCAATGTGGACGAGAAGGACATAGCTGAGCACCTAAGGATACGGTTGAAAAAAGAACAAGAAGAAAAGGAGAAAAAGAGAAAGGAAAAGGCTGAAGCACACCTGTATACGATCATTAAGGTTGCATGTAATGAGGACCTAGTTGAACAGATTGGCAAAGAAATATATTTTGATCTGGTGGATCATGACAAAGTTCGCAGTTTTCGGGTTCAAAGGCAGATGGCATTTAACCAGTTCAAGGAAGAGGTGACTAAAGAATTTGGAATACCAGTTCAATTTCAGCGATTCTGGCTTTGGGCAAAGCGCCAAAATCATACCTACCGTCCAAATCGACCTTTGACTCCCCAGGAAGAAGCACAGTGTGTTGGACAGTTGAGAGAAGTGTCAAATAAGGCGAACAATGCTGAACTGAAGTTGTTTTTGGAAGTAGAACTCGGATTGGATATGCGACCTTTACCACCTCCAGAGAAGACCAAAGAAGATATTCTTCTTTTCTTCAAGCTTTATGATCCTGCGAAAGAAGAACTCCGGTATGTTGGGAGGCTTTTCATAAAGATAAATAGTAAACCAGGGGAGATACTGGCTACGTTAAATGAGATGGCTGGCTTTGCCCCTGATGAAGAGATTGATCTTTATGAGGAGATCAAGTTTGAGCCTAATGTTATGTGCGAACCAGTTGATAAGAGGATGACATTTCGGGGTAGTCAGCTAGAAGATGGGGACATCATATGCTTTCAGAAGACTGTTCGAGCTGGTGAACAGTATCGTTATCCTGAAGTCCCGATGTACATGGAGTATGTGCACAATCGACAGGTTGTCCGGTTTCGATCACTGGAGAAGCCCAAAGACGATGAATTCTCGCTTGAGCTGTCAAAGACTCATAACTATGATGATGTTGTGGAGAGAGTGGCTGCCCATCTGGGCCTAGACGATCCTTCAAAGATACGGCTAACACCGCACAACTGTTACTCCCAGCAACCTAAACCTCAACCAATTAAGTACCGTGGAGTGGAACGTTTAGCTGACATGCTCGTCCACTATAATCAGACTTCGGATATTCTGTATTATGAGGTGTTAGACATCCCTCTTCCGGAACTTCAGGGTTTGAAAACTCTGAAAGTTGCTTTCCATCATGCGACCAAGGATGAAGTGGTTATTCATACCATAAGATTGCCAAAGTACAGCACAGTAGGAGATGTGATTAATGATCTTAAGTCAAAGGTTGAGTTGTCTCATCCAAATGCCGAACTGAGGTTACTGGAAGTTTTCTATCACAAAATTTACAAGATTTTCCCACTAAATGAGAAGATAGAGAACATTAATGATCAGTACTGGACGTTGCGAGCAGAGGAGATCCCAGAAGAGGAGAAAAATCTTGGCCCTCATGATCGTTTAATCCACGTATATCATTTCATGAAGGATCCTGCTCAGAACCAGGTTCAGAATTTTGGAGAACCATTTTTCCTGGTAATCCATGAAGGCGAGACCTTAGCTGAAATTAAAGTTCGCATACAGAAAAAGCTGCAGGTTCCTGATGAAGAGTTTGCAAAGTGGAAGTTTGCATTCTTGTCAATGGGCCGCCCTGACTATCTTGAAGATAACGAGATTTTGTCTGCTCGTTTTCAGAGGAGAGATGTGTATGGGGCTTGGGAGCAGTATCTGGGACTGGAGCACGCGGACAATGCTCCTAAAAGATCTTACGCTGTCAATCAGAACCGCCACACATTCGAGAAGCCAGTGAGAATCTACAATTAG

Protein:   MTLMTPSPLDQQEDDEMLVPHSEFPDGPQPMEAQAETANTVDTQAADDPPSGRFTWTIENFSRLNTKKLYSDIFVVGGYKWRILIFPKGNNVDHLSIYLDVADSATLPYGWSRYAHFSLAVINQIHNKFSVRKETQHQFNARESDWGFTSFMALGELYNPGRGYLVNDTCIIEADVAVRRIVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSETSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDVKRALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEKKRKEKAEAHLYTIIKVACNEDLVEQIGKEIYFDLVDHDKVRSFRVQRQMAFNQFKEEVTKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPQEEAQCVGQLREVSNKANNAELKLFLEVELGLDMRPLPPPEKTKEDILLFFKLYDPAKEELRYVGRLFIKINSKPGEILATLNEMAGFAPDEEIDLYEEIKFEPNVMCEPVDKRMTFRGSQLEDGDIICFQKTVRAGEQYRYPEVPMYMEYVHNRQVVRFRSLEKPKDDEFSLELSKTHNYDDVVERVAAHLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVERLADMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKYSTVGDVINDLKSKVELSHPNAELRLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPAQNQVQNFGEPFFLVIHEGETLAEIKVRIQKKLQVPDEEFAKWKFAFLSMGRPDYLEDNEILSARFQRRDVYGAWEQYLGLEHADNAPKRSYAVNQNRHTFEKPVRIYN